Open Biomedical Multimodal AI Research: From Pixels to Molecules - EMBC2025 Workshop

This workshop will be held in person as part of the 2025 IEEE EMBC Conference, 14th -17th July 2025 at Bella Center in Copenhagen, Denmark.

To register for the workshop, please visit the EMBC 2025 website.

  • Bella Center, Center Boulevard 9, Entrance 7, 2300 Copenhagen S, Copenhagen, Denmark

This workshop welcomes researchers and practitioners with basic Python programming experience. Familiarity with Google Colaboratory is recommended. Please bring a laptop to participate fully.

The rapid expansion of biomedical data from diverse sources presents opportunities to advance healthcare and precision medicine through multimodal AI, which integrates information from multiple data modalities to improve predictive performance and understanding. Open, accessible, and reproducible tools enable the EMBS and wider community to build on state-of-the-art developments efficiently and accelerate innovation.

This workshop aims to equip participants with the skills and tools to address key challenges in multimodal AI, while promoting open research practices.

The first part of the workshop will introduce open research practices in biomedical multimodal AI. It will begin with an overview of open research in this field, followed by hands-on tutorials covering four practical examples: cardiovascular disease assessment, brain disorder diagnosis, cancer classification, and drug–target prediction. These tutorials will use public imaging, omics, and molecular datasets, including MIMIC, ABIDE, TCGA, BindingDB, and BioSNAP, and follow a standardised machine learning pipeline: data loading, preprocessing, embedding, prediction, evaluation, and interpretation, using the open-source multimodal AI library PyKale.

The second part will allow participants to choose one of the four application areas introduced earlier, brain, heart, cancer, or drug, and further explore relevant challenges through collaborative, hands-on activities in small groups. This session is designed to foster deeper engagement, creativity, and problem-solving, supported by the organisers, speakers, and additional demonstrators available both in person and remotely to provide guidance and answer questions throughout.

Organising Committee

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Haiping Lu

Director of the UK Open Multimodal AI Network, Professor of Machine Learning & Head of AI Research Engineering, University of Sheffield

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Peter Charlton

Executive Board Member of the UK Open Multimodal AI Network & Senior Research Scientist, Nokia Bell Labs

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Shuo Zhou

Lecturer in Machine Learning & Deputy Head of AI Research Engineering, University of Sheffield

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Tingting Zhu

Associate Professor in AI for Digital Health, University of Oxford

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Xianyuan Liu

Senior AI Research Engineer & Assistant Head of AI Research Engineering, University of Sheffield

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Zixuan (Kelly) Ding

PhD Candidate in Digital Health, Department of Public Health and Primary Care (PHPC), University of Cambridge

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Sina Tabakhi

PhD Candidate, School of Computer Science, University of Sheffield